EnhancerDB
  1. Home
  2. SNP
  3. rs118061041[chr1:39658518]
Enhancers that have rs118061041[chr1:39658518]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs118061041[chr1:39658518]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39657321 39659049 ZNF274 GTRD no Bone Marrow (K562) 107802897
chr1 39658507 39658518 CDX2 JASPAR yes 28265357
Genes associated with rs118061041[chr1:39658518], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More