EnhancerDB
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  3. rs11808439[chr1:27983008]
Enhancers that have rs11808439[chr1:27983008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11808439[chr1:27983008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27982467 27983077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802612
chr1 27983003 27983023 PPARG JASPAR yes 27719277
chr1 27983006 27983016 HMBOX1 JASPAR yes 27719278
chr1 27983008 27983011 MYB TRANSFAC yes 27719279
Genes associated with rs11808439[chr1:27983008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More