EnhancerDB
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  3. rs118087549[chr16:25007296]
Enhancers that have rs118087549[chr16:25007296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs118087549[chr16:25007296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 21699254
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 108189413
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 21699285
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 108189453
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 21699293
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 108189462
chr16 25007288 25007299 E2F4 JASPAR yes 10093666
chr16 25007288 25007299 E2F6 JASPAR yes 10093667
chr16 25007288 25007302 E2F7 JASPAR yes 10093668
chr16 25007289 25007300 E2F1 JASPAR yes 10093669
Genes associated with rs118087549[chr16:25007296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More