EnhancerDB
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  3. rs11864339[chr16:24993436]
Enhancers that have rs11864339[chr16:24993436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11864339[chr16:24993436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24993425 24993439 ONECUT1 JASPAR yes 10091699
chr16 24993425 24993439 ONECUT2 JASPAR yes 10091700
chr16 24993425 24993439 ONECUT3 JASPAR yes 10091701
chr16 24993427 24993438 PHOX2A JASPAR yes 10091702
chr16 24993427 24993438 PROP1 JASPAR yes 10091703
chr16 24993428 24993438 PAX3 JASPAR yes 10091704
chr16 24993428 24993438 PAX7 JASPAR yes 10091705
chr16 24993430 24993445 SOX21 JASPAR yes 10091706
Genes associated with rs11864339[chr16:24993436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 24930706 25026987 - ARHGAP17 ENSG00000140750.12 25026987 0 Esophagus 0.0883596 14660