EnhancerDB
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  3. rs11871066[chr17:78625984]
Enhancers that have rs11871066[chr17:78625984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs11871066[chr17:78625984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78624989 78626449 TCF7L2 GTRD no Colon (HCT116) 21797079
chr17 78624989 78626449 TCF7L2 GTRD no Colon (HCT116) 108307139
chr17 78625610 78626150 TCF7L2 GTRD no Colon (HCT116) 21797080
chr17 78625610 78626150 TCF7L2 GTRD no Colon (HCT116) 108307140
chr17 78625670 78626139 ZNF143 GTRD no Epithelial (MCF-7) 21797081
chr17 78625670 78626139 ZNF143 GTRD no Epithelial (MCF-7) 108307141
chr17 78625969 78625984 FOXP1 JASPAR yes 56262917
chr17 78625970 78625985 FOXP1 JASPAR yes 56262918
chr17 78625971 78625986 FOXP1 JASPAR yes 56262919
chr17 78625971 78625992 IRF1 JASPAR yes 56262920
chr17 78625972 78625987 FOXP1 JASPAR yes 56262921
chr17 78625975 78625990 PRDM1 JASPAR yes 56262922
chr17 78625975 78625990 STAT2 JASPAR yes 56262923
Genes associated with rs11871066[chr17:78625984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More