EnhancerDB
  1. Home
  2. SNP
  3. rs11898139[chr2:238600516]
Enhancers that have rs11898139[chr2:238600516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11898139[chr2:238600516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238600512 238600516 LFA1 TRANSFAC yes 82133000
Genes associated with rs11898139[chr2:238600516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More