EnhancerDB
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  3. rs11966962[chr6:109051680]
Enhancers that have rs11966962[chr6:109051680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs11966962[chr6:109051680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109051677 109051686 ZEB1 JASPAR yes 104198530
chr6 109051678 109051688 ID4 JASPAR yes 104198531
chr6 109051678 109051688 TCF3 JASPAR yes 104198532
chr6 109051678 109051688 TCF4 JASPAR yes 104198533
chr6 109051679 109051688 SNAI2 JASPAR yes 104198534
chr6 109051680 109051685 USF2 TRANSFAC yes 104198535
Genes associated with rs11966962[chr6:109051680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More