EnhancerDB
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  3. rs12004601[chr9:110302758]
Enhancers that have rs12004601[chr9:110302758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 110293705 110316815 enh25859
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Pancreas (Panc1) Uterus Lung (PC-9) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12004601[chr9:110302758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 110302745 110302758 SCRT2 JASPAR yes 86039842
chr9 110302746 110302764 NFYA JASPAR yes 86039843
chr9 110302748 110302762 ONECUT1 JASPAR yes 86039844
chr9 110302749 110302758 SOX9 JASPAR yes 86039845
chr9 110302751 110302763 PBX1 JASPAR yes 86039846
chr9 110302752 110302767 NFYB JASPAR yes 86039847
chr9 110302754 110302759 NFY TRANSFAC yes 86039848
Genes associated with rs12004601[chr9:110302758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More