EnhancerDB
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  3. rs12006535[chr9:35523827]
Enhancers that have rs12006535[chr9:35523827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 35506145 35528675 enh25546
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12006535[chr9:35523827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 35523814 35523835 IRF1 JASPAR yes 83883497
chr9 35523815 35523836 IRF1 JASPAR yes 83883498
chr9 35523816 35523831 FOXP1 JASPAR yes 83883499
chr9 35523821 35523836 FOXP1 JASPAR yes 83883501
chr9 35523821 35523842 IRF1 JASPAR yes 83883502
chr9 35523823 35523835 FOXC2 JASPAR yes 83883503
chr9 35523824 35523838 IRF7 JASPAR yes 83883504
chr9 35523826 35523838 IRF1 JASPAR yes 83883505
Genes associated with rs12006535[chr9:35523827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More