EnhancerDB
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  3. rs12024323[chr1:19793675]
Enhancers that have rs12024323[chr1:19793675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12024323[chr1:19793675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19793668 19793688 ESR1 JASPAR yes 27194566
chr1 19793671 19793689 ESR2 JASPAR yes 27194567
chr1 19793673 19793692 REST JASPAR yes 27194568
chr1 19793673 19793693 ESR1 JASPAR yes 27194569
chr1 19793674 19793678 LFA1 TRANSFAC yes 27194570
Genes associated with rs12024323[chr1:19793675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More