EnhancerDB
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  3. rs12035563[chr1:229351808]
Enhancers that have rs12035563[chr1:229351808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12035563[chr1:229351808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229351793 229351810 ESR1 JASPAR yes 35975297
chr1 229351793 229351811 ESR1 JASPAR yes 35975298
chr1 229351793 229351811 ESR2 JASPAR yes 35975299
chr1 229351794 229351811 RXRA JASPAR yes 35975300
chr1 229351794 229351814 ESR1 JASPAR yes 35975301
chr1 229351802 229351812 SREBF1 JASPAR yes 35975302
Genes associated with rs12035563[chr1:229351808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More