EnhancerDB
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  3. rs12038401[chr1:234628269]
Enhancers that have rs12038401[chr1:234628269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12038401[chr1:234628269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234626231 234628484 TEF1 GTRD no Bone (Osteoblast) 21393225
chr1 234627422 234628351 ZNF274 GTRD no Liver (HepG2) 21393259
chr1 234627573 234628666 ZBTB33 GTRD no Brain (SK-N-SH) 21393270
chr1 234627624 234628613 ZBTB33 GTRD no Brain (SK-N-SH) 21393273
chr1 234627864 234628702 ZBTB33 GTRD no Brain (SK-N-SH) 21393275
chr1 234627917 234628499 ZBTB33 GTRD no Brain (SK-N-SH) 21393276
chr1 234627926 234628761 ZNF143 GTRD no Epithelial (MCF-7) 21393277
chr1 234627939 234628498 ZBTB33 GTRD no Brain (SK-N-SH) 21393278
chr1 234627948 234628514 ZNF143 GTRD no Epithelial (MCF-7) 21393279
chr1 234627953 234628571 ZBTB33 GTRD no Brain (SK-N-SH) 21393280
chr1 234627986 234628606 ZBTB33 GTRD no Brain (SK-N-SH) 21393281
chr1 234627995 234628628 ZBTB33 GTRD no Brain (SK-N-SH) 21393282
chr1 234628000 234628647 ZBTB33 GTRD no Brain (SK-N-SH) 21393283
chr1 234628017 234628551 ZNF143 GTRD no Epithelial (MCF-7) 21393284
chr1 234628037 234628603 ZBTB33 GTRD no Brain (SK-N-SH) 21393285
chr1 234628054 234628448 ZBTB33 GTRD no Brain (SK-N-SH) 21393286
chr1 234628058 234628402 ZNF143 GTRD no Epithelial (MCF-7) 21393287
chr1 234628071 234628600 ZBTB33 GTRD no Brain (SK-N-SH) 21393288
chr1 234628089 234628513 TCF7L2 GTRD no Colon (HCT116) 21393289
chr1 234628094 234628520 ZNF143 GTRD no Epithelial (MCF-7) 21393290
chr1 234628104 234628524 ZBTB33 GTRD no Brain (SK-N-SH) 21393291
chr1 234628107 234628401 ZNF143 GTRD no Epithelial (MCF-7) 21393292
chr1 234628109 234628461 ZNF143 GTRD no Epithelial (MCF-7) 21393293
chr1 234628137 234628503 ZNF274 GTRD no Cervix (HeLa-S3) 21393294
chr1 234628189 234629899 ZNF274 GTRD no Blood (GM12878) 21393295
chr1 234628194 234628515 ZBTB33 GTRD no Brain (SK-N-SH) 21393296
chr1 234628264 234628279 STAT2 JASPAR yes 36278283
chr1 234628268 234628283 FOXP1 JASPAR yes 36278284
Genes associated with rs12038401[chr1:234628269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More