EnhancerDB
  1. Home
  2. SNP
  3. rs12039721[chr1:224029285]
Enhancers that have rs12039721[chr1:224029285]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12039721[chr1:224029285]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224029279 224029290 FOXA1 JASPAR yes 35679234
chr1 224029279 224029294 FOXA1 JASPAR yes 35679235
chr1 224029280 224029292 FOXC2 JASPAR yes 35679236
chr1 224029284 224029294 HOXB13 JASPAR yes 35679237
Genes associated with rs12039721[chr1:224029285], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More