EnhancerDB
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  3. rs12040498[chr1:33448770]
Enhancers that have rs12040498[chr1:33448770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33448758 33448929 vista1133
VISTA
Transcript factors that have rs12040498[chr1:33448770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33448755 33448770 FOXA1 JASPAR yes 28019070
chr1 33448755 33448770 FOXA1 JASPAR yes 118269154
Genes associated with rs12040498[chr1:33448770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More