EnhancerDB
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  3. rs12040866[chr1:27977271]
Enhancers that have rs12040866[chr1:27977271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27976905 27977430 vista945
VISTA
Transcript factors that have rs12040866[chr1:27977271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27977262 27977272 ZNF740 JASPAR yes 27718293
chr1 27977262 27977272 ZNF740 JASPAR yes 118259944
chr1 27977263 27977273 SP1 JASPAR yes 27718294
chr1 27977263 27977273 SP1 JASPAR yes 118259945
chr1 27977263 27977274 E2F4 JASPAR yes 27718295
chr1 27977263 27977274 E2F4 JASPAR yes 118259946
chr1 27977266 27977272 SP1 TRANSFAC yes 27718296
chr1 27977266 27977272 SP1 TRANSFAC yes 118259947
chr1 27977268 27977273 SP1 TRANSFAC yes 27718297
chr1 27977268 27977273 SP1 TRANSFAC yes 118259948
chr1 27977268 27977283 RFX5 JASPAR yes 27718298
chr1 27977268 27977283 RFX5 JASPAR yes 118259949
Genes associated with rs12040866[chr1:27977271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More