EnhancerDB
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  3. rs12040891[chr1:234621624]
Enhancers that have rs12040891[chr1:234621624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12040891[chr1:234621624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234616468 234622387 ZNF274 GTRD no Liver (HepG2) 21393060
chr1 234617977 234621956 ZNF274 GTRD no Liver (HepG2) 21393061
chr1 234617983 234621941 ZNF274 GTRD no Liver (HepG2) 21393062
chr1 234618402 234622167 ZNF274 GTRD no Liver (HepG2) 21393063
chr1 234619036 234621754 ZNF274 GTRD no Liver (HepG2) 21393065
chr1 234619194 234621695 ZNF274 GTRD no Liver (HepG2) 21393067
chr1 234619311 234621635 ZNF274 GTRD no Liver (HepG2) 21393068
chr1 234619576 234621642 ZNF274 GTRD no Liver (HepG2) 21393071
chr1 234619644 234621906 ZNF274 GTRD no Liver (HepG2) 21393076
chr1 234619747 234622015 ZNF274 GTRD no Liver (HepG2) 21393082
chr1 234620311 234621773 ZNF274 GTRD no Liver (HepG2) 21393086
chr1 234620612 234621712 ZNF274 GTRD no Liver (HepG2) 21393091
chr1 234620623 234621669 ZNF274 GTRD no Liver (HepG2) 21393092
chr1 234621093 234621709 ZNF274 GTRD no Liver (HepG2) 21393112
chr1 234621224 234622475 ZBTB33 GTRD no Brain (SK-N-SH) 21393114
chr1 234621320 234622237 ZNF274 GTRD no Liver (HepG2) 21393115
chr1 234621406 234622513 ZBTB33 GTRD no Brain (SK-N-SH) 21393116
chr1 234621471 234622410 ZBTB33 GTRD no Brain (SK-N-SH) 21393117
chr1 234621496 234622517 ZBTB33 GTRD no Brain (SK-N-SH) 21393118
chr1 234621499 234622573 ZBTB33 GTRD no Brain (SK-N-SH) 21393119
chr1 234621512 234622422 ZBTB33 GTRD no Brain (SK-N-SH) 21393120
chr1 234621520 234622467 ZBTB33 GTRD no Brain (SK-N-SH) 21393121
chr1 234621532 234622206 ZBTB33 GTRD no Brain (SK-N-SH) 21393122
chr1 234621534 234622460 ZBTB33 GTRD no Brain (SK-N-SH) 21393123
chr1 234621553 234622518 ZBTB33 GTRD no Brain (SK-N-SH) 21393124
chr1 234621609 234622420 ZBTB33 GTRD no Brain (SK-N-SH) 21393125
chr1 234621613 234621633 ESR1 JASPAR yes 36277410
chr1 234621616 234621634 ESR1 JASPAR yes 36277411
chr1 234621616 234621634 ESR2 JASPAR yes 36277412
chr1 234621617 234621635 ESR2 JASPAR yes 36277413
chr1 234621617 234621635 NR3C1 JASPAR yes 36277414
chr1 234621618 234621633 ESR2 JASPAR yes 36277415
chr1 234621624 234622306 ZBTB33 GTRD no Brain (SK-N-SH) 21393126
Genes associated with rs12040891[chr1:234621624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More