EnhancerDB
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  3. rs12042727[chr1:218669580]
Enhancers that have rs12042727[chr1:218669580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12042727[chr1:218669580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218669051 218670021 P63 GTRD no Skin (Keratinocyte) 21380894
chr1 218669051 218670021 P63 GTRD no Skin (Keratinocyte) 107870450
chr1 218669101 218669907 P63 GTRD no Skin (Keratinocyte) 21380895
chr1 218669135 218670041 P63 GTRD no Skin (Keratinocyte) 21380896
chr1 218669135 218670041 P63 GTRD no Skin (Keratinocyte) 107870451
chr1 218669329 218670007 ZNF274 GTRD no Cervix (HeLa-S3) 21380897
chr1 218669329 218670007 ZNF274 GTRD no Cervix (HeLa-S3) 107870452
chr1 218669335 218670004 P63 GTRD no Skin (Keratinocyte) 21380898
chr1 218669335 218670004 P63 GTRD no Skin (Keratinocyte) 107870453
chr1 218669406 218669850 TCF7L2 GTRD no Colon (HCT116) 21380899
Genes associated with rs12042727[chr1:218669580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More