EnhancerDB
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  3. rs12059580[chr1:234621308]
Enhancers that have rs12059580[chr1:234621308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12059580[chr1:234621308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234616468 234622387 ZNF274 GTRD no Liver (HepG2) 21393060
chr1 234617977 234621956 ZNF274 GTRD no Liver (HepG2) 21393061
chr1 234617983 234621941 ZNF274 GTRD no Liver (HepG2) 21393062
chr1 234618402 234622167 ZNF274 GTRD no Liver (HepG2) 21393063
chr1 234618465 234621506 ZNF274 GTRD no Liver (HepG2) 21393064
chr1 234619036 234621754 ZNF274 GTRD no Liver (HepG2) 21393065
chr1 234619143 234621594 ZNF274 GTRD no Liver (HepG2) 21393066
chr1 234619194 234621695 ZNF274 GTRD no Liver (HepG2) 21393067
chr1 234619311 234621635 ZNF274 GTRD no Liver (HepG2) 21393068
chr1 234619531 234621459 ZNF274 GTRD no Liver (HepG2) 21393069
chr1 234619566 234621557 ZNF274 GTRD no Liver (HepG2) 21393070
chr1 234619576 234621642 ZNF274 GTRD no Liver (HepG2) 21393071
chr1 234619631 234621342 ZNF274 GTRD no Liver (HepG2) 21393072
chr1 234619631 234621541 ZNF274 GTRD no Liver (HepG2) 21393073
chr1 234619631 234621598 ZNF274 GTRD no Liver (HepG2) 21393074
chr1 234619632 234621613 ZNF274 GTRD no Liver (HepG2) 21393075
chr1 234619644 234621906 ZNF274 GTRD no Liver (HepG2) 21393076
chr1 234619648 234621584 ZNF274 GTRD no Liver (HepG2) 21393077
chr1 234619681 234621539 ZNF274 GTRD no Liver (HepG2) 21393078
chr1 234619696 234621534 ZNF274 GTRD no Liver (HepG2) 21393079
chr1 234619737 234621518 ZNF274 GTRD no Liver (HepG2) 21393080
chr1 234619747 234621547 ZNF274 GTRD no Liver (HepG2) 21393081
chr1 234619747 234622015 ZNF274 GTRD no Liver (HepG2) 21393082
chr1 234619758 234621465 ZNF274 GTRD no Liver (HepG2) 21393083
chr1 234619765 234621522 ZNF274 GTRD no Liver (HepG2) 21393084
chr1 234619777 234621492 ZNF274 GTRD no Liver (HepG2) 21393085
chr1 234620311 234621773 ZNF274 GTRD no Liver (HepG2) 21393086
chr1 234620320 234621453 ZNF274 GTRD no Liver (HepG2) 21393087
chr1 234620453 234621529 ZNF274 GTRD no Liver (HepG2) 21393088
chr1 234620521 234621588 ZNF274 GTRD no Liver (HepG2) 21393089
chr1 234620612 234621712 ZNF274 GTRD no Liver (HepG2) 21393091
chr1 234620623 234621669 ZNF274 GTRD no Liver (HepG2) 21393092
chr1 234620659 234621561 ZNF274 GTRD no Liver (HepG2) 21393094
chr1 234620779 234621513 ZNF274 GTRD no Liver (HepG2) 21393095
chr1 234620855 234621309 ZNF274 GTRD no Liver (HepG2) 21393096
chr1 234620855 234621529 ZNF274 GTRD no Liver (HepG2) 21393097
chr1 234620862 234621428 ZNF274 GTRD no Liver (HepG2) 21393098
chr1 234620865 234621428 ZNF274 GTRD no Liver (HepG2) 21393099
chr1 234620865 234621491 ZNF274 GTRD no Liver (HepG2) 21393100
chr1 234620874 234621323 ZNF274 GTRD no Liver (HepG2) 21393101
chr1 234620891 234621477 ZNF274 GTRD no Liver (HepG2) 21393103
chr1 234620916 234621525 ZNF274 GTRD no Liver (HepG2) 21393104
chr1 234620939 234621358 ZNF274 GTRD no Liver (HepG2) 21393106
chr1 234620951 234621611 ZNF274 GTRD no Liver (HepG2) 21393107
chr1 234620994 234621410 ZNF274 GTRD no Liver (HepG2) 21393108
chr1 234620999 234621563 ZNF274 GTRD no Liver (HepG2) 21393109
chr1 234621093 234621513 ZNF274 GTRD no Liver (HepG2) 21393111
chr1 234621093 234621709 ZNF274 GTRD no Liver (HepG2) 21393112
chr1 234621184 234621354 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393113
chr1 234621224 234622475 ZBTB33 GTRD no Brain (SK-N-SH) 21393114
chr1 234621303 234621312 SP1 TRANSFAC yes 36277377
chr1 234621304 234621312 SP1 TRANSFAC yes 36277378
chr1 234621304 234621314 SP1 JASPAR yes 36277379
Genes associated with rs12059580[chr1:234621308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More