EnhancerDB
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  3. rs12060212[chr1:24604627]
Enhancers that have rs12060212[chr1:24604627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12060212[chr1:24604627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24604626 24604641 MEF2C JASPAR yes 27494708
chr1 24604626 24604647 IRF1 JASPAR yes 27494709
chr1 24604627 24604642 MEF2A JASPAR yes 27494710
Genes associated with rs12060212[chr1:24604627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More