EnhancerDB
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  3. rs12062125[chr1:154399115]
Enhancers that have rs12062125[chr1:154399115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12062125[chr1:154399115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154399111 154399126 PRDM1 JASPAR yes 32291480
chr1 154399111 154399126 STAT2 JASPAR yes 32291481
chr1 154399111 154399129 IRF2 JASPAR yes 32291482
chr1 154399112 154399124 IRF1 JASPAR yes 32291483
Genes associated with rs12062125[chr1:154399115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More