EnhancerDB
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  3. rs12068380[chr1:24602318]
Enhancers that have rs12068380[chr1:24602318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12068380[chr1:24602318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24602305 24602320 MEF2A JASPAR yes 27494303
chr1 24602306 24602321 MEF2C JASPAR yes 27494304
chr1 24602307 24602319 MEF2A JASPAR yes 27494305
chr1 24602307 24602319 MEF2B JASPAR yes 27494306
chr1 24602307 24602319 MEF2D JASPAR yes 27494307
chr1 24602307 24602320 POU3F3 JASPAR yes 27494308
chr1 24602308 24602318 MEF2A JASPAR yes 27494309
chr1 24602310 24602322 IRF1 JASPAR yes 27494311
chr1 24602310 24602324 IRF7 JASPAR yes 27494312
chr1 24602313 24602325 MEF2D JASPAR yes 27494313
chr1 24602315 24602319 YY1 TRANSFAC yes 27494314
Genes associated with rs12068380[chr1:24602318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More