EnhancerDB
  1. Home
  2. SNP
  3. rs12069949[chr1:234862424]
Enhancers that have rs12069949[chr1:234862424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 234862200 234862535 vista5632
VISTA
Transcript factors that have rs12069949[chr1:234862424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234861610 234862648 ZNF274 GTRD no Liver (HepG2) 21396672
chr1 234861610 234862648 ZNF274 GTRD no Liver (HepG2) 107881621
chr1 234861651 234863663 ZNF274 GTRD no Liver (HepG2) 21396674
chr1 234861651 234863663 ZNF274 GTRD no Liver (HepG2) 107881623
chr1 234861769 234862720 ZNF274 GTRD no Liver (HepG2) 21396682
chr1 234861769 234862720 ZNF274 GTRD no Liver (HepG2) 107881626
chr1 234862300 234863707 ZNF274 GTRD no Liver (HepG2) 21396683
chr1 234862300 234863707 ZNF274 GTRD no Liver (HepG2) 107881627
chr1 234862317 234863471 ZNF274 GTRD no Liver (HepG2) 21396684
chr1 234862317 234863471 ZNF274 GTRD no Liver (HepG2) 107881628
chr1 234862346 234862887 ZNF274 GTRD no Liver (HepG2) 21396685
chr1 234862346 234862887 ZNF274 GTRD no Liver (HepG2) 107881629
chr1 234862400 234863710 ZNF274 GTRD no Bone Marrow (K562) 21396686
chr1 234862400 234863710 ZNF274 GTRD no Bone Marrow (K562) 107881630
chr1 234862414 234862432 NR3C1 JASPAR yes 36308009
chr1 234862414 234862432 NR3C1 JASPAR yes 118484565
chr1 234862415 234862430 AR JASPAR yes 36308010
chr1 234862415 234862430 AR JASPAR yes 118484566
chr1 234862415 234862432 NR3C1 JASPAR yes 36308011
chr1 234862415 234862432 NR3C2 JASPAR yes 36308012
chr1 234862415 234862432 NR3C1 JASPAR yes 118484567
chr1 234862415 234862432 NR3C2 JASPAR yes 118484568
chr1 234862416 234863560 P63 GTRD no Skin (Keratinocyte) 21396687
chr1 234862416 234863560 P63 GTRD no Skin (Keratinocyte) 107881631
chr1 234862423 234862434 FOXP2 JASPAR yes 36308013
chr1 234862423 234862434 FOXP2 JASPAR yes 118484569
Genes associated with rs12069949[chr1:234862424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More