EnhancerDB
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  3. rs12071872[chr1:39655682]
Enhancers that have rs12071872[chr1:39655682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12071872[chr1:39655682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39655670 39655685 FOXP1 JASPAR yes 28264888
chr1 39655671 39655682 FOXA1 JASPAR yes 28264889
chr1 39655671 39655686 FOXA1 JASPAR yes 28264890
chr1 39655672 39655683 FOXB1 JASPAR yes 28264892
chr1 39655672 39655683 FOXC1 JASPAR yes 28264893
chr1 39655672 39655684 FOXC2 JASPAR yes 28264894
chr1 39655673 39655684 FOXP2 JASPAR yes 28264895
chr1 39655675 39655682 FOXD2 JASPAR yes 28264896
chr1 39655675 39655682 FOXI1 JASPAR yes 28264897
chr1 39655675 39655682 FOXL1 JASPAR yes 28264898
chr1 39655675 39655682 FOXO4 JASPAR yes 28264899
chr1 39655675 39655682 FOXO6 JASPAR yes 28264900
chr1 39655675 39655682 FOXP3 JASPAR yes 28264901
chr1 39655675 39655683 FOXD1 JASPAR yes 28264902
chr1 39655675 39655683 FOXO3 JASPAR yes 28264903
chr1 39655677 39655693 SOX4 JASPAR yes 28264904
Genes associated with rs12071872[chr1:39655682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More