EnhancerDB
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  3. rs12072715[chr1:39857476]
Enhancers that have rs12072715[chr1:39857476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12072715[chr1:39857476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39857247 39857971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21325343
chr1 39857247 39857971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802900
chr1 39857472 39857481 NKX3-2 JASPAR yes 28272493
chr1 39857473 39857481 ISL2 JASPAR yes 28272494
Genes associated with rs12072715[chr1:39857476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More