EnhancerDB
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  3. rs12076557[chr1:16016564]
Enhancers that have rs12076557[chr1:16016564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16015949 16039390 enh77
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12076557[chr1:16016564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16016548 16016569 IRF1 JASPAR yes 26994321
chr1 16016550 16016565 STAT2 JASPAR yes 26994322
chr1 16016551 16016572 IRF1 JASPAR yes 26994323
chr1 16016552 16016572 RREB1 JASPAR yes 26994324
chr1 16016552 16016573 IRF1 JASPAR yes 26994325
chr1 16016553 16016568 FOXP1 JASPAR yes 26994326
chr1 16016554 16016569 FOXP1 JASPAR yes 26994327
chr1 16016555 16016570 FOXP1 JASPAR yes 26994328
chr1 16016556 16016571 FOXP1 JASPAR yes 26994329
chr1 16016557 16016572 FOXP1 JASPAR yes 26994330
chr1 16016557 16016577 RREB1 JASPAR yes 26994331
chr1 16016557 16016578 IRF1 JASPAR yes 26994332
chr1 16016558 16016579 IRF1 JASPAR yes 26994333
chr1 16016559 16016574 FOXP1 JASPAR yes 26994334
chr1 16016562 16016582 RREB1 JASPAR yes 26994335
chr1 16016563 16016584 IRF1 JASPAR yes 26994336
chr1 16016564 16016570 TCF4 TRANSFAC yes 26994337
chr1 16016564 16016579 FOXP1 JASPAR yes 26994338
Genes associated with rs12076557[chr1:16016564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More