EnhancerDB
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  3. rs12076577[chr1:39656073]
Enhancers that have rs12076577[chr1:39656073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12076577[chr1:39656073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39656055 39656075 RREB1 JASPAR yes 28265029
chr1 39656058 39656073 FOXP1 JASPAR yes 28265031
chr1 39656061 39656081 RREB1 JASPAR yes 28265033
chr1 39656061 39656082 IRF1 JASPAR yes 28265034
chr1 39656062 39656077 FOXP1 JASPAR yes 28265035
chr1 39656062 39656083 IRF1 JASPAR yes 28265036
chr1 39656063 39656078 STAT2 JASPAR yes 28265037
chr1 39656066 39656078 IRF1 JASPAR yes 28265038
chr1 39656067 39656088 IRF1 JASPAR yes 28265039
chr1 39656068 39656074 TCF4 TRANSFAC yes 28265040
chr1 39656068 39656083 FOXP1 JASPAR yes 28265041
chr1 39656068 39656089 IRF1 JASPAR yes 28265042
chr1 39656069 39656080 FOXP2 JASPAR yes 28265043
chr1 39656069 39656081 FOXC2 JASPAR yes 28265044
chr1 39656069 39656084 STAT2 JASPAR yes 28265045
chr1 39656069 39656090 IRF1 JASPAR yes 28265046
chr1 39656070 39656085 FOXP1 JASPAR yes 28265047
chr1 39656070 39656091 IRF1 JASPAR yes 28265048
chr1 39656071 39656092 IRF1 JASPAR yes 28265049
chr1 39656072 39656087 FOXP1 JASPAR yes 28265050
chr1 39656073 39656088 FOXP1 JASPAR yes 28265051
Genes associated with rs12076577[chr1:39656073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More