EnhancerDB
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  3. rs12078176[chr1:1787734]
Enhancers that have rs12078176[chr1:1787734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12078176[chr1:1787734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1787723 1787744 IRF1 JASPAR yes 26207514
chr1 1787725 1787740 PRDM1 JASPAR yes 26207515
chr1 1787725 1787740 STAT2 JASPAR yes 26207516
chr1 1787726 1787740 STAT1 JASPAR yes 26207517
chr1 1787730 1787745 MEF2C JASPAR yes 26207518
Genes associated with rs12078176[chr1:1787734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More