EnhancerDB
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  3. rs12078663[chr1:226846227]
Enhancers that have rs12078663[chr1:226846227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12078663[chr1:226846227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226846218 226846233 MEF2C JASPAR yes 35828773
chr1 226846218 226846239 IRF1 JASPAR yes 35828774
chr1 226846219 226846234 MEF2A JASPAR yes 35828775
chr1 226846220 226846232 MEF2A JASPAR yes 35828776
chr1 226846220 226846232 MEF2B JASPAR yes 35828777
chr1 226846220 226846232 MEF2D JASPAR yes 35828778
chr1 226846221 226846231 MEF2A JASPAR yes 35828779
chr1 226846222 226846237 PRDM1 JASPAR yes 35828780
chr1 226846222 226846240 IRF2 JASPAR yes 35828781
chr1 226846223 226846235 IRF1 JASPAR yes 35828782
Genes associated with rs12078663[chr1:226846227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More