EnhancerDB
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  3. rs12080544[chr1:244492597]
Enhancers that have rs12080544[chr1:244492597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244477784 244495570 enh12850
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12080544[chr1:244492597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244492589 244492602 NR2F1 JASPAR yes 36728456
chr1 244492591 244492602 ESRRA JASPAR yes 36728457
chr1 244492591 244492602 ESRRB JASPAR yes 36728458
chr1 244492592 244492600 NR4A2 JASPAR yes 36728459
chr1 244492593 244492603 RORA JASPAR yes 36728460
Genes associated with rs12080544[chr1:244492597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More