EnhancerDB
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  3. rs12081615[chr1:52036857]
Enhancers that have rs12081615[chr1:52036857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs12081615[chr1:52036857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52036850 52036859 SNAI2 JASPAR yes 28852234
chr1 52036850 52036860 FIGLA JASPAR yes 28852235
chr1 52036850 52036860 ID4 JASPAR yes 28852236
chr1 52036850 52036860 TCF3 JASPAR yes 28852237
chr1 52036850 52036860 TCF4 JASPAR yes 28852238
Genes associated with rs12081615[chr1:52036857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More