EnhancerDB
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  3. rs12082392[chr1:234683854]
Enhancers that have rs12082392[chr1:234683854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12082392[chr1:234683854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234683542 234684949 ZNF274 GTRD no Cervix (HeLa-S3) 21394367
chr1 234683613 234684920 ZNF274 GTRD no Liver (HepG2) 21394368
chr1 234683636 234685965 TEF1 GTRD no Bone (Osteoblast) 21394369
chr1 234683714 234684930 ZNF274 GTRD no Liver (HepG2) 21394370
chr1 234683728 234684857 ZNF274 GTRD no Cervix (HeLa-S3) 21394371
chr1 234683733 234684743 ZNF274 GTRD no Bone Marrow (K562) 21394372
chr1 234683773 234684766 ZNF274 GTRD no Liver (HepG2) 21394373
chr1 234683815 234685462 ZNF274 GTRD no Cervix (HeLa-S3) 21394374
chr1 234683817 234684638 ZNF274 GTRD no Liver (HepG2) 21394375
chr1 234683834 234684881 ZNF274 GTRD no Liver (HepG2) 21394376
chr1 234683842 234684786 ZNF274 GTRD no Liver (HepG2) 21394377
chr1 234683847 234684731 ZNF274 GTRD no Liver (HepG2) 21394378
chr1 234683847 234684735 ZNF274 GTRD no Liver (HepG2) 21394379
chr1 234683847 234684741 ZNF274 GTRD no Liver (HepG2) 21394380
chr1 234683848 234683863 MEF2C JASPAR yes 36287019
chr1 234683853 234684670 ZNF274 GTRD no Liver (HepG2) 21394381
Genes associated with rs12082392[chr1:234683854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More