EnhancerDB
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  3. rs12088495[chr1:16209958]
Enhancers that have rs12088495[chr1:16209958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12088495[chr1:16209958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16209947 16209966 RFX2 JASPAR yes 27010351
chr1 16209958 16209973 HNF4A JASPAR yes 27010352
Genes associated with rs12088495[chr1:16209958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More