EnhancerDB

Enhancers that have rs12090359[chr1:168458546]

Back to top

Chrom.	Start	End	Enhancer ID	Tissues that enhancer appears	More
chr1	168433465	168471139	enh12354	Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)

Transcript factors that have rs12090359[chr1:168458546]

Back to top

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	id	More
chr1	168458535	168458556	ZNF263	JASPAR	yes		32931472
chr1	168458545	168458549	LFA1	TRANSFAC	yes		32931473

Genes associated with rs12090359[chr1:168458546], comfirmed by eQTL

Back to top

Blank TSI value indicates lack of sufficient expression for calculation
Chrom.	Start	End	Strand	Gene name	Ensembl ID	TSS of gene	Distance between TSS and SNP	Tissue	q Value	id	More