EnhancerDB
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  3. rs12097197[chr1:226860944]
Enhancers that have rs12097197[chr1:226860944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12097197[chr1:226860944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226860943 226860952 ZEB1 JASPAR yes 35831104
chr1 226860943 226860955 NHLH1 JASPAR yes 35831105
chr1 226860943 226860958 SCRT1 JASPAR yes 35831106
chr1 226860944 226860954 ID4 JASPAR yes 35831107
chr1 226860944 226860954 NHLH1 JASPAR yes 35831108
chr1 226860944 226860954 TCF3 JASPAR yes 35831109
chr1 226860944 226860954 TCF4 JASPAR yes 35831110
Genes associated with rs12097197[chr1:226860944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More