EnhancerDB
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  3. rs12118548[chr1:235093131]
Enhancers that have rs12118548[chr1:235093131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12118548[chr1:235093131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235092848 235094748 ZNF274 GTRD no Cervix (HeLa-S3) 21401232
chr1 235092895 235094711 ZNF274 GTRD no Bone Marrow (K562) 21401234
chr1 235092902 235093229 ZNF274 GTRD no Bone Marrow (K562) 21401235
chr1 235092925 235093649 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401236
chr1 235092933 235093446 ZNF274 GTRD no Bone Marrow (K562) 21401237
chr1 235092936 235093729 TCF7L2 GTRD no Colon (HCT116) 21401238
chr1 235092943 235093434 TCF7L2 GTRD no Colon (HCT116) 21401239
chr1 235092943 235094459 ZNF274 GTRD no Bone Marrow (K562) 21401240
chr1 235092944 235094520 ZNF274 GTRD no Bone Marrow (K562) 21401241
chr1 235092945 235093380 ZNF274 GTRD no Bone Marrow (K562) 21401242
chr1 235092955 235094392 ZNF143 GTRD no Epithelial (MCF-7) 21401243
chr1 235092959 235094300 ZNF143 GTRD no Epithelial (MCF-7) 21401244
chr1 235092959 235094406 ZNF274 GTRD no Bone Marrow (K562) 21401245
chr1 235092962 235094433 ZNF274 GTRD no Blood (GM12878) 21401246
chr1 235092962 235094434 ZNF143 GTRD no Epithelial (MCF-7) 21401247
chr1 235092967 235094334 ZNF143 GTRD no Epithelial (MCF-7) 21401248
chr1 235092970 235094414 ZNF274 GTRD no Liver (HepG2) 21401249
chr1 235092972 235094573 ZNF143 GTRD no Epithelial (MCF-7) 21401250
chr1 235092973 235094822 ZNF274 GTRD no Bone Marrow (K562) 21401251
chr1 235092975 235094613 ZNF143 GTRD no Epithelial (MCF-7) 21401252
chr1 235092981 235093904 ZNF143 GTRD no Epithelial (MCF-7) 21401253
chr1 235092988 235094467 ZNF143 GTRD no Epithelial (MCF-7) 21401254
chr1 235092990 235094419 ZNF274 GTRD no Bone Marrow (K562) 21401255
chr1 235092991 235094753 ZNF274 GTRD no Cervix (HeLa-S3) 21401256
chr1 235092995 235094663 ZNF143 GTRD no Epithelial (MCF-7) 21401257
chr1 235092999 235093807 TCF7L2 GTRD no Colon (HCT116) 21401258
chr1 235093013 235094662 ZNF274 GTRD no Liver (HepG2) 21401259
chr1 235093017 235093373 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401260
chr1 235093025 235093485 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401261
chr1 235093025 235094641 ZNF274 GTRD no Cervix (HeLa-S3) 21401262
chr1 235093027 235093591 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401263
chr1 235093029 235093465 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401264
chr1 235093046 235093462 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401265
chr1 235093056 235093436 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401266
chr1 235093061 235093534 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21401267
chr1 235093062 235093353 ZNF274 GTRD no Bone Marrow (K562) 21401268
chr1 235093063 235093533 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21401269
chr1 235093064 235093508 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21401270
chr1 235093067 235093463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21401271
chr1 235093068 235093584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21401272
chr1 235093078 235094320 ZNF274 GTRD no Bone Marrow (K562) 21401273
chr1 235093079 235094371 ZNF274 GTRD no Bone Marrow (K562) 21401274
chr1 235093080 235093484 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401275
chr1 235093084 235093420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401276
chr1 235093086 235093551 TCF7L2 GTRD no Colon (HCT116) 21401277
chr1 235093088 235093584 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401278
chr1 235093088 235094487 ZNF274 GTRD no Bone Marrow (K562) 21401279
chr1 235093090 235093454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401280
chr1 235093092 235093864 TCF7L2 GTRD no Colon (HCT116) 21401281
chr1 235093093 235094545 ZNF274 GTRD no Blood (GM12878) 21401282
chr1 235093098 235093408 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21401283
chr1 235093100 235093430 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401284
chr1 235093102 235093558 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401285
chr1 235093109 235093509 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401286
chr1 235093116 235093533 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401287
chr1 235093116 235093740 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401288
chr1 235093120 235093454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401289
chr1 235093121 235093471 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401290
chr1 235093121 235093485 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401291
chr1 235093126 235093141 MEF2C JASPAR yes 36334526
chr1 235093129 235093144 FOXP1 JASPAR yes 36334527
chr1 235093130 235093145 FOXP1 JASPAR yes 36334528
Genes associated with rs12118548[chr1:235093131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More