EnhancerDB
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  3. rs12121242[chr1:19740609]
Enhancers that have rs12121242[chr1:19740609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12121242[chr1:19740609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19740597 19740612 ZIC3 JASPAR yes 27187318
chr1 19740597 19740612 ZIC4 JASPAR yes 27187319
chr1 19740598 19740612 ZIC1 JASPAR yes 27187320
Genes associated with rs12121242[chr1:19740609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More