EnhancerDB
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Enhancers that have rs12122751[chr1:171394149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs12122751[chr1:171394149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171392976 171394439 ZNF143 GTRD no Epithelial (MCF-7) 21349627
chr1 171392990 171394373 ZNF143 GTRD no Epithelial (MCF-7) 21349628
chr1 171393268 171394511 ZNF143 GTRD no Epithelial (MCF-7) 21349629
chr1 171393422 171394291 ZNF143 GTRD no Epithelial (MCF-7) 21349630
chr1 171393471 171394189 ZNF143 GTRD no Epithelial (MCF-7) 21349631
chr1 171393484 171394361 ZNF143 GTRD no Epithelial (MCF-7) 21349632
chr1 171393524 171394434 ZNF143 GTRD no Epithelial (MCF-7) 21349633
chr1 171393530 171394190 ZNF143 GTRD no Epithelial (MCF-7) 21349634
chr1 171393560 171394280 ZNF143 GTRD no Epithelial (MCF-7) 21349635
chr1 171393612 171394182 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21349636
chr1 171393812 171394217 ZNF143 GTRD no Epithelial (MCF-7) 21349638
chr1 171393830 171394202 ZNF143 GTRD no Epithelial (MCF-7) 21349639
chr1 171393860 171394337 ZNF143 GTRD no Epithelial (MCF-7) 21349640
chr1 171394146 171394153 GATA3 TRANSFAC yes 33079062
chr1 171394146 171394154 GATA5 JASPAR yes 33079063
chr1 171394147 171394159 TEF JASPAR yes 33079064
chr1 171394149 171394152 MYB TRANSFAC yes 33079065
Genes associated with rs12122751[chr1:171394149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More