EnhancerDB
  1. Home
  2. SNP
  3. rs12126686[chr1:171399309]
Enhancers that have rs12126686[chr1:171399309]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs12126686[chr1:171399309]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171399300 171399310 GBX2 JASPAR yes 33079744
chr1 171399300 171399310 MNX1 JASPAR yes 33079745
chr1 171399301 171399309 BARX1 JASPAR yes 33079746
chr1 171399301 171399309 EN1 JASPAR yes 33079747
chr1 171399301 171399309 ISL2 JASPAR yes 33079748
chr1 171399301 171399309 MSX1 JASPAR yes 33079749
chr1 171399301 171399309 MSX2 JASPAR yes 33079750
chr1 171399301 171399309 PDX1 JASPAR yes 33079751
Genes associated with rs12126686[chr1:171399309], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More