EnhancerDB
  1. Home
  2. SNP
  3. rs12128254[chr1:205268097]
Enhancers that have rs12128254[chr1:205268097]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12128254[chr1:205268097]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205266432 205268724 ZNF274 GTRD no Bone Marrow (K562) 107861711
chr1 205266444 205268309 ZNF274 GTRD no Bone Marrow (K562) 107861712
chr1 205266495 205268292 ZNF274 GTRD no Bone Marrow (K562) 107861713
chr1 205266535 205268135 ZNF274 GTRD no Bone Marrow (K562) 107861714
chr1 205266721 205268097 ZNF274 GTRD no Bone Marrow (K562) 107861716
chr1 205267151 205268432 ZNF274 GTRD no Bone Marrow (K562) 107861732
chr1 205267367 205268397 ZNF143 GTRD no Epithelial (MCF-7) 107861739
chr1 205267409 205268399 ZNF143 GTRD no Epithelial (MCF-7) 107861741
chr1 205267482 205268187 EP300 UCSC Txn Factor no Conserved 107861745
chr1 205267482 205268187 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861746
chr1 205267513 205268109 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21371720
chr1 205267513 205268109 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107861750
chr1 205267513 205268109 TCF7L2 UCSC Txn Factor no Conserved 107861751
chr1 205267520 205268229 TCF7L2 GTRD no Colon (HCT116) 21371721
chr1 205267520 205268229 TCF7L2 GTRD no Colon (HCT116) 107861753
chr1 205267723 205268099 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371748
chr1 205267723 205268099 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107861802
chr1 205268094 205268107 ZBTB18 JASPAR yes 34753212
chr1 205268096 205268108 TAL1 JASPAR yes 34753213
Genes associated with rs12128254[chr1:205268097], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More