EnhancerDB
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  3. rs12135906[chr1:182057112]
Enhancers that have rs12135906[chr1:182057112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12135906[chr1:182057112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 21356902
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 107849827
chr1 182056145 182057480 TCF7L2 GTRD no Colon (HCT116) 107849828
chr1 182056195 182057406 ZNF274 GTRD no Blood (GM12878) 107849829
chr1 182056430 182057127 ZNF274 GTRD no Bone Marrow (K562) 21356904
chr1 182056430 182057127 ZNF274 GTRD no Bone Marrow (K562) 107849832
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 21356906
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 107849835
chr1 182057024 182057540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21356914
chr1 182057024 182057554 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21356915
chr1 182057034 182057530 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21356916
chr1 182057101 182057112 NRF1 JASPAR yes 33588665
Genes associated with rs12135906[chr1:182057112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More