EnhancerDB
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  3. rs12140932[chr1:173370335]
Enhancers that have rs12140932[chr1:173370335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs12140932[chr1:173370335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173370248 173370517 SOX2 GTRD no Neural Stem Cells (H9) 21351237
chr1 173370263 173370500 SOX2 GTRD no Neural Stem Cells (H9) 21351238
chr1 173370327 173370342 STAT1 JASPAR yes 33195171
chr1 173370329 173370340 STAT1 JASPAR yes 33195172
chr1 173370329 173370340 STAT3 JASPAR yes 33195173
chr1 173370330 173370338 STAT6 TRANSFAC yes 33195174
Genes associated with rs12140932[chr1:173370335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More