EnhancerDB
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  3. rs12142161[chr1:172322797]
Enhancers that have rs12142161[chr1:172322797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12142161[chr1:172322797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172322789 172322802 POU2F2 JASPAR yes 33124971
chr1 172322792 172322806 IRF7 JASPAR yes 33124972
chr1 172322797 172322801 YY1 TRANSFAC yes 33124973
Genes associated with rs12142161[chr1:172322797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More