EnhancerDB
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  3. rs12143377[chr1:172324535]
Enhancers that have rs12143377[chr1:172324535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12143377[chr1:172324535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172324521 172324536 MEF2A JASPAR yes 33125190
chr1 172324526 172324541 MEF2C JASPAR yes 33125193
chr1 172324527 172324542 MEF2A JASPAR yes 33125194
chr1 172324528 172324540 MEF2A JASPAR yes 33125195
chr1 172324529 172324539 MEF2A JASPAR yes 33125196
Genes associated with rs12143377[chr1:172324535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More