EnhancerDB
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  3. rs12143622[chr1:172321632]
Enhancers that have rs12143622[chr1:172321632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12143622[chr1:172321632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172321627 172321642 TFAP2A JASPAR yes 33124775
chr1 172321627 172321642 TFAP2C JASPAR yes 33124776
chr1 172321629 172321644 TFAP2A JASPAR yes 33124777
chr1 172321630 172321641 TFAP2A JASPAR yes 33124778
chr1 172321630 172321641 TFAP2B JASPAR yes 33124779
chr1 172321630 172321641 TFAP2C JASPAR yes 33124780
Genes associated with rs12143622[chr1:172321632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More