EnhancerDB
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  3. rs12143704[chr1:172319486]
Enhancers that have rs12143704[chr1:172319486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12143704[chr1:172319486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172319466 172319486 RREB1 JASPAR yes 33124457
chr1 172319468 172319488 RREB1 JASPAR yes 33124458
chr1 172319470 172319490 RREB1 JASPAR yes 33124459
chr1 172319472 172319492 RREB1 JASPAR yes 33124460
chr1 172319479 172319491 FOXI1 JASPAR yes 33124461
Genes associated with rs12143704[chr1:172319486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More