EnhancerDB
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  3. rs12143970[chr1:8279090]
Enhancers that have rs12143970[chr1:8279090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12143970[chr1:8279090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8279078 8279090 NHLH1 JASPAR yes 26529206
chr1 8279087 8279100 NFKB2 JASPAR yes 26529208
chr1 8279088 8279099 NFKB1 JASPAR yes 26529209
Genes associated with rs12143970[chr1:8279090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More