EnhancerDB
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  3. rs12146870[chr12:125205728]
Enhancers that have rs12146870[chr12:125205728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125205619 125206047 vista15327
VISTA
Transcript factors that have rs12146870[chr12:125205728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125205289 125205765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582328
chr12 125205289 125205765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069614
chr12 125205413 125205729 TCF7L2 GTRD no Colon (HCT116) 21582332
chr12 125205413 125205729 TCF7L2 GTRD no Colon (HCT116) 108069616
chr12 125205426 125205810 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582333
chr12 125205426 125205810 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069617
chr12 125205606 125205896 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582334
chr12 125205606 125205896 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069618
chr12 125205687 125206077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582335
chr12 125205687 125206077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069619
chr12 125205715 125205730 AR JASPAR yes 82497610
chr12 125205715 125205730 AR JASPAR yes 124413296
chr12 125205721 125205732 ESRRA JASPAR yes 82497611
chr12 125205721 125205732 ESRRB JASPAR yes 82497612
chr12 125205721 125205732 ESRRA JASPAR yes 124413297
chr12 125205721 125205732 ESRRB JASPAR yes 124413298
Genes associated with rs12146870[chr12:125205728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More