EnhancerDB
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  3. rs12192205[chr6:30788351]
Enhancers that have rs12192205[chr6:30788351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12192205[chr6:30788351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30787766 30788518 POLR2A UCSC Txn Factor no Conserved 108539554
chr6 30788337 30788353 POU4F2 JASPAR yes 101054826
chr6 30788343 30788353 POU6F2 JASPAR yes 101054827
chr6 30788344 30788354 ALX3 JASPAR yes 101054828
chr6 30788344 30788354 EMX1 JASPAR yes 101054829
chr6 30788344 30788354 EMX2 JASPAR yes 101054830
chr6 30788344 30788354 EN2 JASPAR yes 101054831
chr6 30788344 30788354 ESX1 JASPAR yes 101054832
chr6 30788344 30788354 EVX1 JASPAR yes 101054833
chr6 30788344 30788354 EVX2 JASPAR yes 101054834
chr6 30788344 30788354 GBX1 JASPAR yes 101054835
chr6 30788344 30788354 GBX2 JASPAR yes 101054836
chr6 30788344 30788354 GSX1 JASPAR yes 101054837
chr6 30788344 30788354 GSX2 JASPAR yes 101054838
chr6 30788344 30788354 HESX1 JASPAR yes 101054839
chr6 30788344 30788354 HOXA2 JASPAR yes 101054840
chr6 30788344 30788354 HOXB2 JASPAR yes 101054841
chr6 30788344 30788354 HOXB3 JASPAR yes 101054842
chr6 30788344 30788354 LBX2 JASPAR yes 101054843
chr6 30788344 30788354 LHX2 JASPAR yes 101054844
chr6 30788344 30788354 LHX6 JASPAR yes 101054845
chr6 30788344 30788354 MEOX1 JASPAR yes 101054846
chr6 30788344 30788354 MEOX2 JASPAR yes 101054847
chr6 30788344 30788354 MIXL1 JASPAR yes 101054848
chr6 30788344 30788354 NOTO JASPAR yes 101054849
chr6 30788344 30788354 POU6F1 JASPAR yes 101054850
chr6 30788344 30788354 RAX JASPAR yes 101054851
chr6 30788345 30788353 BSX JASPAR yes 101054852
chr6 30788345 30788353 DLX6 JASPAR yes 101054853
chr6 30788345 30788353 EN1 JASPAR yes 101054854
chr6 30788345 30788353 ISX JASPAR yes 101054855
chr6 30788345 30788353 LBX1 JASPAR yes 101054856
chr6 30788345 30788353 LHX9 JASPAR yes 101054857
chr6 30788345 30788353 LMX1A JASPAR yes 101054858
chr6 30788345 30788353 LMX1B JASPAR yes 101054859
chr6 30788345 30788353 NKX6-1 JASPAR yes 101054860
chr6 30788345 30788353 NKX6-2 JASPAR yes 101054861
chr6 30788345 30788353 PAX4 JASPAR yes 101054862
chr6 30788345 30788353 PDX1 JASPAR yes 101054863
chr6 30788345 30788353 PRRX1 JASPAR yes 101054864
chr6 30788345 30788353 RAX2 JASPAR yes 101054865
chr6 30788345 30788353 SHOX JASPAR yes 101054866
chr6 30788345 30788353 UNCX JASPAR yes 101054867
chr6 30788345 30788353 VAX1 JASPAR yes 101054868
chr6 30788345 30788353 VAX2 JASPAR yes 101054869
chr6 30788345 30788353 VSX1 JASPAR yes 101054870
chr6 30788345 30788353 VSX2 JASPAR yes 101054871
chr6 30788345 30788359 POU1F1 JASPAR yes 101054872
chr6 30788346 30788358 POU3F1 JASPAR yes 101054873
chr6 30788346 30788358 POU3F2 JASPAR yes 101054874
chr6 30788346 30788359 POU3F3 JASPAR yes 101054875
chr6 30788347 30788359 POU2F1 JASPAR yes 101054876
chr6 30788350 30788353 MYB TRANSFAC yes 101054877
Genes associated with rs12192205[chr6:30788351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More