EnhancerDB
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  3. rs12193346[chr6:30780510]
Enhancers that have rs12193346[chr6:30780510]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12193346[chr6:30780510]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30780506 30780519 NR2F1 JASPAR yes 101053702
chr6 30780508 30780519 ESRRA JASPAR yes 101053703
chr6 30780508 30780519 ESRRB JASPAR yes 101053704
chr6 30780510 30780520 RORA JASPAR yes 101053705
Genes associated with rs12193346[chr6:30780510], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More