EnhancerDB
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  3. rs12196585[chr6:16724307]
Enhancers that have rs12196585[chr6:16724307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16724246 16724395 vista51173
VISTA
Transcript factors that have rs12196585[chr6:16724307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16724293 16724307 JUN JASPAR yes 70327059
chr6 16724293 16724307 JUN JASPAR yes 100333304
chr6 16724296 16724307 USF2 JASPAR yes 70327060
chr6 16724296 16724307 USF2 JASPAR yes 100333305
chr6 16724299 16724311 TEAD1 JASPAR yes 70327061
chr6 16724299 16724311 TEAD1 JASPAR yes 100333306
Genes associated with rs12196585[chr6:16724307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More